NetPath: a public resource of curated signal transduction pathways

Kumaran Kandasamy; S. Sujatha Mohan; Rajesh Raju; Shivakumar Keerthikumar; Ghantasala S. Sameer Kumar; Abhilash K. Venugopal; Deepthi Telikicherla; J. Daniel Navarro; Suresh Mathivanan; Christian Pecquet; Sashi Kanth Gollapudi; Sudhir Gopal Tattikota; Shyam Mohan; Hariprasad Padhukasahasram; Yashwanth Subbannayya; Renu Goel; Harrys K. C. Jacob; Jun Zhong; Raja Sekhar; Vishalakshi Nanjappa; Lavanya Balakrishnan; Roopashree Subbaiah; Y. L. Ramachandra; B. Abdul Rahiman; T. S. Keshava Prasad; Jian-Xin Lin; Jon C. D. Houtman; Stephen Desiderio; Jean-Christophe Renauld; Stefan N. Constantinescu; Osamu Ohara; Toshio Hirano; Masato Kubo; Sujay Singh; Purvesh Khatri; Sorin Draghici; Gary D. Bader; Chris Sander; Warren J. Leonard; Akhilesh Pandey

doi:10.1186/gb-2010-11-1-r3

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NetPath: a public resource of curated signal transduction pathways

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NetPath: a public resource of curated signal transduction pathways

Kumaran Kandasamy, S. Sujatha Mohan, Rajesh Raju, Shivakumar Keerthikumar, Ghantasala S. Sameer Kumar, Abhilash K. Venugopal, Deepthi Telikicherla, J. Daniel Navarro, Suresh Mathivanan, Christian Pecquet, …

Genome biology, Vol.11(1), pp.R3-R3

12/01/2010

DOI: https://doi.org/10.1186/gb-2010-11-1-r3

PMCID: PMC2847715

PMID: 20067622

Abstract

Biotechnology & Applied Microbiology

Genetics & Heredity

Life Sciences & Biomedicine

Science & Technology

We have developed NetPath as a resource of curated human signaling pathways. As an initial step, NetPath provides detailed maps of a number of immune signaling pathways, which include approximately 1,600 reactions annotated from the literature and more than 2,800 instances of transcriptionally regulated genes - all linked to over 5,500 published articles. We anticipate NetPath to become a consolidated resource for human signaling pathways that should enable systems biology approaches.

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Title: NetPath: a public resource of curated signal transduction pathways
Creators: Kumaran Kandasamy - Johns Hopkins University
S. Sujatha Mohan - Inst Bioinformat, Bangalore 560066, Karnataka, India
Rajesh Raju - Kuvempu University
Shivakumar Keerthikumar - Institute of Bioinformatics
Ghantasala S. Sameer Kumar - Institute of Bioinformatics
Abhilash K. Venugopal - Institute of Bioinformatics
Deepthi Telikicherla - Institute of Bioinformatics
J. Daniel Navarro - Inst Bioinformat, Bangalore 560066, Karnataka, India
Suresh Mathivanan - Institute of Bioinformatics
Christian Pecquet - RIKEN Center for Integrative Medical Sciences
Sashi Kanth Gollapudi - Institute of Bioinformatics
Sudhir Gopal Tattikota - Institute of Bioinformatics
Shyam Mohan - Institute of Bioinformatics
Hariprasad Padhukasahasram - Institute of Bioinformatics
Yashwanth Subbannayya - Institute of Bioinformatics
Renu Goel - Institute of Bioinformatics
Harrys K. C. Jacob - Johns Hopkins University
Jun Zhong - Johns Hopkins University
Raja Sekhar - Institute of Bioinformatics
Vishalakshi Nanjappa - Institute of Bioinformatics
Lavanya Balakrishnan - Institute of Bioinformatics
Roopashree Subbaiah - Institute of Bioinformatics
Y. L. Ramachandra - Kuvempu University
B. Abdul Rahiman - Kuvempu University
T. S. Keshava Prasad - Institute of Bioinformatics
Jian-Xin Lin - NHLBI, Lab Mol Immunol, NIH, Bethesda, MD 20892 USA
Jon C. D. Houtman - University of Iowa
Stephen Desiderio - Johns Hopkins Medicine
Jean-Christophe Renauld - de Duve Institute
Stefan N. Constantinescu - de Duve Institute
Osamu Ohara - Kazusa DNA Research Institute
Toshio Hirano - Osaka University
Masato Kubo - RIKEN Center for Integrative Medical Sciences
Sujay Singh - IMGENEX India
Purvesh Khatri - Wayne State University
Sorin Draghici - The Barbara Ann Karmanos Cancer Institute
Gary D. Bader - University of Toronto
Chris Sander - Memorial Sloan Kettering Cancer Center
Warren J. Leonard - National Heart Lung and Blood Institute
Akhilesh Pandey - Johns Hopkins University
Publication Details: Genome biology, Vol.11(1), pp.R3-R3
Publisher: Springer Nature
Number of pages: 9
Date published: 12/01/2010
Grant note: ZIAHL005401 / NATIONAL HEART, LUNG, AND BLOOD INSTITUTE; United States Department of Health & Human Services; National Institutes of Health (NIH) - USA; NIH National Heart Lung & Blood Institute (NHLBI) U54 RR020839 / National Institutes of Health; United States Department of Health & Human Services; National Institutes of Health (NIH) - USA P50CA088843 / NATIONAL CANCER INSTITUTE; United States Department of Health & Human Services; National Institutes of Health (NIH) - USA; NIH National Cancer Institute (NCI) CA 88843 / Johns Hopkins Breast Cancer SPORE U54RR020839 / NATIONAL CENTER FOR RESEARCH RESOURCES; United States Department of Health & Human Services; National Institutes of Health (NIH) - USA; NIH National Center for Research Resources (NCRR) R01DK089167 / NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES; United States Department of Health & Human Services; National Institutes of Health (NIH) - USA; NIH National Institute of Diabetes & Digestive & Kidney Diseases (NIDDK) W81XWH-06-1-0428 / Department of Defense; United States Department of Defense
Identifiers: 99783458202346
Academic Unit: School of Biosciences
Language: English
Resource Type: Journal article

NetPath: a public resource of curated signal transduction pathways

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