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A half-site multimeric enzyme achieves its cooperativity without conformational changes
Journal article   Open access   Peer reviewed

A half-site multimeric enzyme achieves its cooperativity without conformational changes

Mirella Vivoli, Jiayun Pang and Nicholas J Harmer
Scientific Reports, Vol.7(1), p.11
28/11/2017
PMID: 29184087

Abstract

Binding Sites Catalytic Domain Enzyme Activation Enzymes - chemistry Enzymes - genetics Enzymes - metabolism Hydrogen Bonding Models, Molecular Protein Binding Protein Conformation Protein Multimerization Quantum Theory Structure-Activity Relationship Substrate Specificity Mutation
Cooperativity is a feature many multimeric proteins use to control activity. Here we show that the bacterial heptose isomerase GmhA displays homotropic positive and negative cooperativity among its four protomers. Most similar proteins achieve this through conformational changes: GmhA instead employs a delicate network of hydrogen bonds, and couples pairs of active sites controlled by a unique water channel. This network apparently raises the Lewis acidity of the catalytic zinc, thus increasing the activity at one active site at the cost of preventing substrate from adopting a reactive conformation at the paired negatively cooperative site - a "half-site" behavior. Our study establishes the principle that multimeric enzymes can exploit this cooperativity without conformational changes to maximize their catalytic power and control. More broadly, this subtlety by which enzymes regulate functions could be used to explore new inhibitor design strategies.
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https://doi.org/10.1038/s41598-017-16421-2View
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